really need a mod to let you use the radiant as a flagship cause honestly i don't see a point to this mod having to swap ships mid battle in every battle is a waste of time.
Basically, the way it works in the code is if the ship has the Automated Ship hullmod, you can assign an AI core officer, but not a human one. That can't be modified. The Automated Ship hullmod blocks command transfer, but hullmods
can be modified (this is what this mod does). Integrating an AI core also blocks command transfer, but the code that handles that can't be modified. The only things I can change in this situation are the hullmod itself, or whether ships have the hullmod— I can't modify how officer assignment works.