If anything, all he'll accomplish is get a plasma cannon to the face
Which will cause massive flux spikes that aren't evened out by venting because a lot of venting power is going into graviton beams.
i mean, take the stock apogee
with vents and minus shield upkeep it has only 460 flux dissipation per second
normal crew, 0.6 flux/damage
3*200 is 600 *0,6 = 360
so if the eagle has 0% flux boost to it's weapons, the apogee is left with only 100 flux dissipation per second
as the flux rises, it will get even smaller
and let me tell you... 100 flux dissipation isn't a lot for firing weapons
this means that depending on how flux efficient the apogee's weapons are (most energy weapons are really inneficient)
that the eagle might just tank the apogee
and that is eagle vs apogee, where the eagle is clearly not as good as the apogee