This already happened three times to me (not allowing me to get 100%) , however, I'm not completely sure how to produce it.
What happens is that in Hornet's Nest, when (1~4) enemy is retreating, my friendly AI seems to fail to understand commands. They wouldn't capture nodes, charge opponents ships nor simply move to ordered destination. They'll go AWAY from it.
This seems to apply to fighters. Frigates/Destroyers sometimes get the same behaviour, not always.
Didn't get many good pics. My fighters were at the Command Relay, moving away from the ordered spots.

