Also, if I want a Carrier Flagship, I can't have my fighters attack anyone. I simmed a few battles today, and I couldn't kill an Eagle with a Carrier-Destroyer and two Frigates because nothing, even my own ship if I told it to attack and put it on autopilot, would actually attack. So, I was in a 1v1 with a smaller ship, rather than a 5v1. Commanding fighters directly just worked so much for smoothly in general. This glitch later stopped happening after a reload, but the fighters were still pointless against larger ships because I had to charge into battle rather than hang back and let my fighters harass.