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If the faction was designed to be stronger, that explains it.
Concerning doritos being apex versions of remnant, this is hard to confirm since the lore is very limited on them. I don't know their origin, and the descriptions of dorito weapons imply that of researchers trying to figure them out and generally finding that it was beyond their ability. Going from that level of ignorance to being able to replicate fully-functional ones seems a bit too far to go.
What would I trim? Any energy weapon merely got it's damage switched to kinetic without anything else changed. In my experience, shields and therefore kinetic weapons are very meta, and the main issue energy weapons have is a lack of damage types - with few vanilla exceptions like the graviton beam. And of course the dorito weapons to bring them down to the level of high-end vanilla weapons. High explosive energy weapons are less of a concern to me since vanilla ones already kind of fulfill that role with things like the phase lance and they are awful vs shields.